STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Y2F7YTH domain-containing protein. (140 aa)    
Predicted Functional Partners:
A0A060X5I6
CPSF_A domain-containing protein.
    
 0.965
A0A060X715
CPSF_A domain-containing protein.
    
 0.965
A0A060WPS7
Fip1 domain-containing protein.
   
 0.954
A0A060Y090
Fip1 domain-containing protein.
   
 0.954
A0A060YTF6
WD_REPEATS_REGION domain-containing protein.
    
 
 0.941
A0A060WFS4
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.940
A0A060WG46
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.940
A0A060XWW2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.940
A0A060VWH4
Uncharacterized protein.
    
 0.935
A0A060ZH59
Uncharacterized protein.
   
 0.878
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.