STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Y5C6SEC7 domain-containing protein. (548 aa)    
Predicted Functional Partners:
A0A060WDE9
Uncharacterized protein.
    
 0.743
A0A060WYJ3
Uncharacterized protein.
    
 0.743
A0A060WZW6
Uncharacterized protein.
    
 0.743
A0A060XUQ3
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.743
A0A060XWQ6
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.743
A0A060VRG5
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.673
A0A060XIM3
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.673
A0A060W1G7
SEC7 domain-containing protein.
   
 
0.646
A0A060WST2
Uncharacterized protein.
   
 
 0.646
A0A060WZD0
SEC7 domain-containing protein.
   
 
0.646
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (20%) [HD]