STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Y6H1F-box domain-containing protein. (412 aa)    
Predicted Functional Partners:
A0A060XIZ3
Uncharacterized protein.
   
    0.856
A0A060W821
Uncharacterized protein.
   
    0.811
A0A060W265
Uncharacterized protein.
   
    0.773
A0A060XW33
Uncharacterized protein.
   
    0.773
A0A060Y0M9
Uncharacterized protein.
   
    0.773
A0A060Y181
Uncharacterized protein.
   
    0.773
A0A060X6G1
Uncharacterized protein.
   
    0.752
A0A060XNP6
Uncharacterized protein.
   
    0.752
A0A060YI12
Uncharacterized protein.
   
    0.752
A0A060WP43
Cir_N domain-containing protein.
   
    0.598
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.