A0A060Y6Q4 protein (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A060Y6Q4

Uncharacterized protein. (110 aa)

Predicted Functional Partners:

A0A060W249

0.979

A0A060VQ59

0.975

A0A060WWE3

0.975

A0A060WYG6

0.975

A0A060YD53

0.975

A0A060YCE4

0.914

A0A060W5M6

0.840

A0A060WJM7

0.840

A0A060Z1D1

0.794

GBG2

0.794

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A060VQ59	A0A060W249	A0A060VQ59	A0A060W249	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.847
A0A060VQ59	A0A060W5M6	A0A060VQ59	A0A060W5M6	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion; Belongs to the parathyroid hormone family.	0.888
A0A060VQ59	A0A060WJM7	A0A060VQ59	A0A060WJM7	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion; Belongs to the parathyroid hormone family.	0.917
A0A060VQ59	A0A060WWE3	A0A060VQ59	A0A060WWE3	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	G_PROTEIN_RECEP_F2_4 domain-containing protein.	0.832
A0A060VQ59	A0A060Y6Q4	A0A060VQ59	A0A060Y6Q4	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.975
A0A060VQ59	A0A060YCE4	A0A060VQ59	A0A060YCE4	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.978
A0A060VQ59	A0A060YD53	A0A060VQ59	A0A060YD53	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.831
A0A060VQ59	A0A060Z1D1	A0A060VQ59	A0A060Z1D1	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.721
A0A060VQ59	GBG2	A0A060VQ59	C1BH40	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.721
A0A060W249	A0A060VQ59	A0A060W249	A0A060VQ59	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.847
A0A060W249	A0A060W5M6	A0A060W249	A0A060W5M6	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion; Belongs to the parathyroid hormone family.	0.914
A0A060W249	A0A060WJM7	A0A060W249	A0A060WJM7	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Parathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion; Belongs to the parathyroid hormone family.	0.954
A0A060W249	A0A060WWE3	A0A060W249	A0A060WWE3	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	G_PROTEIN_RECEP_F2_4 domain-containing protein.	0.837
A0A060W249	A0A060WYG6	A0A060W249	A0A060WYG6	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor 2 family.	0.847
A0A060W249	A0A060Y6Q4	A0A060W249	A0A060Y6Q4	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.979
A0A060W249	A0A060YCE4	A0A060W249	A0A060YCE4	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.979
A0A060W249	A0A060YD53	A0A060W249	A0A060YD53	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.837
A0A060W249	A0A060Z1D1	A0A060W249	A0A060Z1D1	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.721
A0A060W249	GBG2	A0A060W249	C1BH40	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.721
A0A060W5M6	A0A060VQ59	A0A060W5M6	A0A060VQ59	Parathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion; Belongs to the parathyroid hormone family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.888