STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Y7C1Homeobox domain-containing protein. (271 aa)    
Predicted Functional Partners:
A0A060X4E5
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
     
 0.714
A0A060XNK3
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
     
 0.714
A0A060YEF5
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
     
 0.714
A0A060WB65
Runt-related transcription factor.
    
 0.538
A0A060YFJ9
Runt domain-containing protein.
    
 0.538
A0A060YTI3
Runt domain-containing protein.
    
 0.538
A0A060YUR8
Uncharacterized protein.
    
 0.538
A0A060YVR6
RunxI domain-containing protein.
    
 0.538
A0A060VZ12
hSH3 domain-containing protein.
    
 
 0.448
A0A060X243
Uncharacterized protein.
    
 
 0.448
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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