STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YA58Uncharacterized protein. (543 aa)    
Predicted Functional Partners:
A0A060WC08
Phosphoglycerate kinase.
    
 0.888
A0A060WM25
Phosphoglycerate kinase.
    
 0.888
A0A060VXM6
FMN hydroxy acid dehydrogenase domain-containing protein.
     
 0.825
A0A060W0N1
FMN hydroxy acid dehydrogenase domain-containing protein.
     
 0.825
A0A060YF08
FMN hydroxy acid dehydrogenase domain-containing protein.
     
 0.825
A0A060VW41
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.795
A0A060VWF5
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.795
A0A060YAR4
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.795
A0A060VQI0
2-Hacid_dh domain-containing protein.
     
 0.791
A0A060VS61
Uncharacterized protein.
     
 0.791
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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