STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YC60Uncharacterized protein. (401 aa)    
Predicted Functional Partners:
A0A060X5S1
Thymidylat_synt domain-containing protein.
    
  0.811
A0A060WXI7
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.736
A0A060XAJ6
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.736
A0A060Z2M5
Thymidine kinase.
    
  0.697
A0A060Z3B7
Thymidine kinase.
    
  0.697
A0A060YLJ3
Uncharacterized protein.
    
  0.669
A0A060YTW4
Uncharacterized protein.
    
  0.669
A0A060WQ18
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.659
A0A060WRC9
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.659
A0A060XB41
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.659
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.