STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YDF1Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (730 aa)    
Predicted Functional Partners:
A0A060WBJ4
MFS domain-containing protein.
     
 0.677
A0A060WDP9
MFS domain-containing protein.
     
 0.677
A0A060Y800
MFS domain-containing protein.
     
 0.677
A0A060XS52
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
  
 
0.644
A0A060WAT6
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
  
 
0.642
A0A060YN86
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
  
 
0.635
A0A060W2C5
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
  
 
0.631
A0A060VV75
Uncharacterized protein.
    
 0.616
A0A060ZP80
Uncharacterized protein.
    
0.616
A0A060YBR2
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.582
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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