STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YDT4Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (671 aa)    
Predicted Functional Partners:
A0A060YKJ0
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.990
A0A060VSQ2
ACB domain-containing protein.
  
 0.979
A0A060VW78
ACB domain-containing protein.
  
 0.979
A0A060Z0X4
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.978
A0A060Z6A1
Thiolase_N domain-containing protein.
  
 0.978
A0A060ZG54
Thiolase_C domain-containing protein.
  
 0.978
A0A060WFG6
ETF domain-containing protein.
 
 0.976
A0A060WTZ9
ETF domain-containing protein.
  
 0.968
A0A060YDM2
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.966
A0A060X0J8
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.963
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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