STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YGR5Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
A0A060XRR2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 
 0.781
COX17
Cytochrome c oxidase copper chaperone.
    
 0.737
COX17-2
Cytochrome c oxidase copper chaperone.
    
 0.737
A0A060XUP3
COX assembly mitochondrial protein.
   
 
 0.710
A0A060Y9B2
COX assembly mitochondrial protein.
   
 
 0.710
A0A060W983
Uncharacterized protein.
    
 0.691
A0A060W8H3
CHCH domain-containing protein.
   
 
 0.676
A0A060XBS9
Uncharacterized protein.
   
 
 0.676
A0A060XWL5
CHCH domain-containing protein.
   
 
 0.676
A0A060YPD1
CHCH domain-containing protein.
   
 
 0.676
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.