STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YJK2Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
A0A060XC05
BHD_1 domain-containing protein.
    
 0.992
ENY2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
   
 
 0.957
A0A060VSB1
PCI domain-containing protein.
    
 
 0.923
A0A060XVK4
Uncharacterized protein.
    
 
 0.912
A0A060WDL8
Thioredoxin domain-containing protein; Belongs to the NDK family.
  
 
 0.902
A0A060YHE7
NDK domain-containing protein.
  
 
 0.902
A0A060X9P5
Uncharacterized protein.
   
 0.873
A0A060XXK4
Uncharacterized protein.
    
 
 0.865
A0A060Y4U0
PCI domain-containing protein.
    
 
 0.865
A0A060W6N4
Uncharacterized protein.
    
 
 0.862
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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