A0A060YJR4 protein (Oncorhynchus mykiss) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

A0A060YJR4

Uncharacterized protein. (209 aa)

Predicted Functional Partners:

A0A060WWC5

0.946

A0A060X2X8

0.946

A0A060Y903

0.946

A0A060YVZ2

0.946

A0A060W1W3

0.934

A0A060W4Y3

0.934

A0A060Y487

0.926

A0A060X4R2

0.919

A0A060XTV1

0.919

A0A060X7G5

0.906

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060W1W3	A0A060WWC5	Uncharacterized protein.	SWIRM domain-containing protein.	0.856
A0A060W1W3	A0A060X2X8	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.856
A0A060W1W3	A0A060X4R2	Uncharacterized protein.	HMG box domain-containing protein.	0.694
A0A060W1W3	A0A060XTV1	Uncharacterized protein.	HMG box domain-containing protein.	0.694
A0A060W1W3	A0A060Y487	Uncharacterized protein.	Uncharacterized protein.	0.423
A0A060W1W3	A0A060Y903	Uncharacterized protein.	SWIRM domain-containing protein.	0.856
A0A060W1W3	A0A060YJR4	Uncharacterized protein.	Uncharacterized protein.	0.934
A0A060W1W3	A0A060YVZ2	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A060W4Y3	A0A060WWC5	Uncharacterized protein.	SWIRM domain-containing protein.	0.856
A0A060W4Y3	A0A060X2X8	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.856
A0A060W4Y3	A0A060X4R2	Uncharacterized protein.	HMG box domain-containing protein.	0.694
A0A060W4Y3	A0A060XTV1	Uncharacterized protein.	HMG box domain-containing protein.	0.694
A0A060W4Y3	A0A060Y487	Uncharacterized protein.	Uncharacterized protein.	0.423
A0A060W4Y3	A0A060Y903	Uncharacterized protein.	SWIRM domain-containing protein.	0.856
A0A060W4Y3	A0A060YJR4	Uncharacterized protein.	Uncharacterized protein.	0.934
A0A060W4Y3	A0A060YVZ2	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A060WWC5	A0A060W1W3	SWIRM domain-containing protein.	Uncharacterized protein.	0.856
A0A060WWC5	A0A060W4Y3	SWIRM domain-containing protein.	Uncharacterized protein.	0.856
A0A060WWC5	A0A060X4R2	SWIRM domain-containing protein.	HMG box domain-containing protein.	0.960
A0A060WWC5	A0A060XTV1	SWIRM domain-containing protein.	HMG box domain-containing protein.	0.960