STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YMS0Ribosomal_L7Ae domain-containing protein. (161 aa)    
Predicted Functional Partners:
A0A060XGS0
Protein kinase domain-containing protein.
    
 0.950
A0A060XTH4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.950
A0A060XU41
Uncharacterized protein.
    
 0.950
W5S0E9_ONCMY
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.901
W5S4C9_ONCMY
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.901
A0A060XD78
Ribosomal_L7Ae domain-containing protein.
  
0.889
A0A060XWN4
Ribosomal_L7Ae domain-containing protein.
  
0.889
A0A060WGZ5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.887
A0A060XTF2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.887
A0A060Y0U7
Uncharacterized protein; Belongs to the cyclin family.
    
 0.887
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.