STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YNW6Uncharacterized protein. (166 aa)    
Predicted Functional Partners:
A0A060W3I6
PRA1 family protein.
      
 0.523
A0A060X8A2
PRA1 family protein.
      
 0.523
A0A060XB32
PRA1 family protein.
      
 0.523
PRAF3
PRA1 family protein.
      
 0.523
A0A060WVY9
Uncharacterized protein.
  
  
 0.506
A0A060XG52
Uncharacterized protein.
      
 0.506
A0A060XHN9
Uncharacterized protein.
      
 0.506
A0A060Z5H1
Uncharacterized protein.
  
     0.503
A0A060WI06
Uncharacterized protein.
  
     0.496
A0A060Z4A1
Uncharacterized protein.
  
     0.489
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.