STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YSK6Calx-beta domain-containing protein. (158 aa)    
Predicted Functional Partners:
A0A060YN58
Uncharacterized protein.
   
 0.846
A0A060YSL9
Uncharacterized protein.
   
 0.846
A0A060Z7Z6
Uncharacterized protein.
   
 0.846
A0A060Z809
Uncharacterized protein.
   
 0.846
A0A060ZD39
Uncharacterized protein.
   
 0.846
A0A060XI95
Uncharacterized protein.
     
 0.565
A0A060Z902
MAM domain-containing protein.
     
 0.565
A0A060Y7W2
Calx-beta domain-containing protein.
  
     0.533
A0A060WH98
Na_Ca_ex domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
     
 0.526
A0A060Y1U6
Calx-beta domain-containing protein.
  
     0.526
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.