STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YSQ5Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
A0A060WCB4
TPR_REGION domain-containing protein.
   
 0.977
A0A060X7T6
TPR_REGION domain-containing protein.
   
 0.977
A0A060W7V5
Uncharacterized protein.
    
 0.975
A0A060XV96
Uncharacterized protein.
    
 0.975
A0A060WW56
Uncharacterized protein.
    
 0.974
A0A060XPS6
Uncharacterized protein.
    
 0.974
A0A060VXB8
Uncharacterized protein.
    
 
 0.971
A0A060WQE0
MPN domain-containing protein.
    
 0.969
A0A060XX10
MPN domain-containing protein.
    
 0.969
A0A060Y319
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
 
 0.965
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.