STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YTK9Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
A0A060YKC2
Phosphoinositide phospholipase C.
  
  
  0.907
A0A060Z0Z1
PLCXc domain-containing protein.
  
  0.906
A0A061A7S0
PLCXc domain-containing protein.
  
  
  0.905
A0A060YQZ3
Phosphoinositide phospholipase C.
  
  
  0.903
A0A060YUI1
Phosphoinositide phospholipase C.
  
  0.903
A0A060XNJ5
Phosphoinositide phospholipase C.
  
  
 0.901
A0A060Y3G0
Uncharacterized protein.
  
  
  0.900
A0A061A0G4
Phosphoinositide phospholipase C.
  
  
  0.899
A0A060Z9R7
Phosphoinositide phospholipase C.
  
  
  0.877
A0A060VMB4
Diacylglycerol kinase.
   
 0.875
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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