STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YUZ3Uncharacterized protein. (90 aa)    
Predicted Functional Partners:
A0A060Y4D1
Uncharacterized protein; Belongs to the intermediate filament family.
   
 0.892
A0A060Z6N8
LEM domain-containing protein.
   
 0.891
A0A060WWE9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.884
A0A060ZC76
Uncharacterized protein.
    
 0.884
A0A060W618
Uncharacterized protein; Belongs to the intermediate filament family.
   
 0.873
A0A060WD49
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.873
A0A060XLC6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.871
A0A060YUK4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.871
A0A060Z2X7
Uncharacterized protein.
    
 0.871
A0A060WQJ4
Uncharacterized protein; Belongs to the intermediate filament family.
   
 0.870
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.