STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YV37Carbohydrate sulfotransferase. (342 aa)    
Predicted Functional Partners:
A0A060W415
Hexosyltransferase.
     
 0.858
A0A060Y045
Uncharacterized protein.
     
 0.845
A0A060WEA5
Carbohydrate sulfotransferase.
  
  
 
0.836
A0A060WSU1
Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans.
     
 0.835
A0A060XSU1
Uncharacterized protein.
     
 0.835
A0A060XTF0
Hexosyltransferase.
     
 0.835
A0A060YDI6
Carbohydrate sulfotransferase.
  
  
 
0.832
A0A060Y3C2
Carbohydrate sulfotransferase.
  
  
 
0.831
A0A060XPG7
Decorin; May affect the rate of fibrils formation.
     
 0.573
A0A060XQ14
Decorin; May affect the rate of fibrils formation.
     
 0.573
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (24%) [HD]