STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YVB5Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
A0A060VXB8
Uncharacterized protein.
    
 0.987
A0A060WS21
Uncharacterized protein.
   
 0.977
A0A060YHQ7
Uncharacterized protein.
   
 0.977
A0A060XWV4
Uncharacterized protein.
   
 0.964
A0A060XXF1
Uncharacterized protein.
   
 0.964
A0A060YKD4
Uncharacterized protein.
    
 0.934
A0A060Z1P2
Uncharacterized protein.
    
 0.934
A0A060Z9V3
Uncharacterized protein.
    
 0.934
A0A060WF42
Uncharacterized protein.
    
 0.901
A0A060WH37
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.901
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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