STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060YYT6Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
A0A060VUF3
Proteasome subunit alpha type.
   
 
 0.995
A0A060VQY7
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 
 0.992
A0A060XUI2
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 
 0.992
A0A060WDP5
Proteasome subunit alpha type.
   
 
 0.990
A0A060WGZ9
Proteasome subunit alpha type.
   
 
 0.990
PSA3
Proteasome subunit alpha type.
   
 
 0.990
A0A060WEX2
Proteasome subunit beta.
   
 
 0.988
A0A060YTD8
Proteasome subunit beta.
   
 
 0.988
A0A060XEY9
Proteasome subunit beta.
   
 
 0.986
A0A060YSB5
Proteasome subunit beta.
   
 
 0.986
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.