STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Z093Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
A0A060WPI6
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.950
A0A060X3B5
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.950
A0A060VY39
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.949
A0A060WFF0
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.949
A0A060Y5R8
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.949
IF4EA
Eukaryotic translation initiation factor 4E-1A; Belongs to the eukaryotic initiation factor 4E family.
   
 0.949
A0A060W407
Uncharacterized protein.
   
 0.904
A0A060W9V3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.904
A0A060WA58
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.904
A0A060Y107
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.904
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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