STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Z1P1Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
A0A060VV93
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
   
 0.993
A0A060WAY6
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
   
 0.993
A0A060WNN3
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.993
A0A060WTN8
Uncharacterized protein.
   
 0.993
A0A060WU10
RING-type domain-containing protein.
   
 0.993
A0A060XHW6
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.993
A0A060WA63
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.990
A0A060W684
V-SNARE coiled-coil homology domain-containing protein.
    
 
 0.972
A0A060WJR4
CNH domain-containing protein.
    
 
 0.972
A0A060WZB1
Uncharacterized protein.
    
 
 0.972
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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