STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Z4R1Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
A0A060X5A4
Uncharacterized protein.
   
 0.936
A0A060XXR5
Uncharacterized protein.
   
 0.936
A0A060WGR4
Uncharacterized protein.
   
 0.918
A0A060X8N4
Uncharacterized protein.
   
 0.918
A0A060XFA2
Uncharacterized protein.
   
 0.918
A0A060XSJ1
Uncharacterized protein.
   
 0.918
A0A060WXY0
Uncharacterized protein.
   
 0.892
A0A060XPZ4
Uncharacterized protein.
   
 0.892
A0A060WJM0
RRM domain-containing protein.
   
 0.878
A0A060WXM6
RRM domain-containing protein.
   
 0.878
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.