STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060ZCT9Uncharacterized protein. (66 aa)    
Predicted Functional Partners:
A0A060ZEW9
Uncharacterized protein.
  
 
 0.910
A0A060XKT3
PKS_ER domain-containing protein.
  
 0.891
A0A060Y8H8
PKS_ER domain-containing protein.
  
 0.891
A0A060W596
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.880
A0A060XNA5
Uncharacterized protein.
  
 
 0.877
A0A060Z0S2
DHFR domain-containing protein.
  
 
 0.871
GSTO1
Glutathione transferase omega-1.
    
 0.871
A0A060XC01
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 0.867
A0A060VMQ9
PKS_ER domain-containing protein.
  
 0.865
A0A060X4B3
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.865
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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