STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060ZEZ5Uncharacterized protein. (32 aa)    
Predicted Functional Partners:
UBIM
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.916
UBIM-2
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.916
A0A060WKF8
Uncharacterized protein.
    
 0.780
A0A060WTV0
Uncharacterized protein.
   
   0.702
A0A060YCL2
Uncharacterized protein.
   
 
 0.691
A0A060YN58
Uncharacterized protein.
    
  0.690
A0A060YSL9
Uncharacterized protein.
    
  0.690
A0A060Z7Z6
Uncharacterized protein.
    
  0.690
A0A060Z809
Uncharacterized protein.
    
  0.690
A0A060ZD39
Uncharacterized protein.
    
  0.690
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.