STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060ZG36PWWP domain-containing protein. (143 aa)    
Predicted Functional Partners:
A0A060W062
WD_REPEATS_REGION domain-containing protein.
    
 0.879
A0A060ZHR6
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.860
A0A060Y569
WD_REPEATS_REGION domain-containing protein.
   
 0.855
A0A060X9P9
Fe2OG dioxygenase domain-containing protein.
    
 0.851
A0A060Z4Q0
P4Hc domain-containing protein.
    
 0.851
A0A060ZA99
Uncharacterized protein.
    
 0.851
A0A060ZZZ5
Uncharacterized protein.
    
 0.851
A0A060VR44
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.844
A0A060XCN2
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.844
A0A060WH11
Uncharacterized protein.
     
 0.843
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.