Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A060WHG0 | A0A060XTX7 | A0A060WHG0 | A0A060XTX7 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.932 |
A0A060WHG0 | A0A060XV19 | A0A060WHG0 | A0A060XV19 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.931 |
A0A060WHG0 | A0A060Y8A8 | A0A060WHG0 | A0A060Y8A8 | Ubiquitin-like domain-containing protein. | HECT domain-containing protein. | 0.602 |
A0A060WHG0 | A0A060YHE5 | A0A060WHG0 | A0A060YHE5 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.602 |
A0A060WHG0 | A0A060YHX1 | A0A060WHG0 | A0A060YHX1 | Ubiquitin-like domain-containing protein. | HECT domain-containing protein. | 0.602 |
A0A060WHG0 | A0A060ZHR6 | A0A060WHG0 | A0A060ZHR6 | Ubiquitin-like domain-containing protein. | Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.955 |
A0A060WHG0 | A0A061A5G4 | A0A060WHG0 | A0A061A5G4 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.680 |
A0A060WHG0 | RNF8 | A0A060WHG0 | A0A060XFX1 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.920 |
A0A060XIH3 | A0A060XJK9 | A0A060XIH3 | A0A060XJK9 | Uncharacterized protein. | Uncharacterized protein. | 0.940 |
A0A060XIH3 | A0A060ZHR6 | A0A060XIH3 | A0A060ZHR6 | Uncharacterized protein. | Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.722 |
A0A060XIH3 | A0A061A5G4 | A0A060XIH3 | A0A061A5G4 | Uncharacterized protein. | Uncharacterized protein. | 0.811 |
A0A060XJK9 | A0A060XIH3 | A0A060XJK9 | A0A060XIH3 | Uncharacterized protein. | Uncharacterized protein. | 0.940 |
A0A060XJK9 | A0A060ZHR6 | A0A060XJK9 | A0A060ZHR6 | Uncharacterized protein. | Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.722 |
A0A060XJK9 | A0A061A5G4 | A0A060XJK9 | A0A061A5G4 | Uncharacterized protein. | Uncharacterized protein. | 0.811 |
A0A060XTX7 | A0A060WHG0 | A0A060XTX7 | A0A060WHG0 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.932 |
A0A060XTX7 | A0A060XV19 | A0A060XTX7 | A0A060XV19 | Uncharacterized protein. | Uncharacterized protein. | 0.954 |
A0A060XTX7 | A0A060Y8A8 | A0A060XTX7 | A0A060Y8A8 | Uncharacterized protein. | HECT domain-containing protein. | 0.602 |
A0A060XTX7 | A0A060YHE5 | A0A060XTX7 | A0A060YHE5 | Uncharacterized protein. | Uncharacterized protein. | 0.602 |
A0A060XTX7 | A0A060YHX1 | A0A060XTX7 | A0A060YHX1 | Uncharacterized protein. | HECT domain-containing protein. | 0.602 |
A0A060XTX7 | A0A060ZHR6 | A0A060XTX7 | A0A060ZHR6 | Uncharacterized protein. | Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.955 |
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