STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A061A8Q7Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
A0A060ZA98
Folate_rec domain-containing protein.
    
 
 0.507
A0A060WUW1
Uncharacterized protein.
      
 0.505
A0A060XD63
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.505
A0A060XHT1
Uncharacterized protein.
      
 0.497
A0A060YU20
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.497
A0A060WAT8
Pyruvate carboxyltransferase domain-containing protein.
      
 0.454
A0A060X518
Pyruvate carboxyltransferase domain-containing protein.
      
 0.454
A0A060WPH4
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.452
A0A060XLZ9
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.452
A0A060W1Q3
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.451
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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