STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A061AC67Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
A0A060WRI7
Uncharacterized protein.
     
 0.802
A0A060WZP2
Uncharacterized protein.
     
 0.802
A0A060X0A4
Uncharacterized protein.
     
 0.802
A0A060WFS4
Cleavage and polyadenylation specificity factor subunit 2.
   
 
  0.761
A0A060WG46
Cleavage and polyadenylation specificity factor subunit 2.
   
 
  0.761
A0A060XWW2
Cleavage and polyadenylation specificity factor subunit 2.
   
 
  0.761
A0A060XZW2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.751
A0A060ZH59
Uncharacterized protein.
     
 0.748
A0A060WZ23
Ubiquitin-like domain-containing protein.
    
  0.702
A0A060YFT4
Ubiquitin-like domain-containing protein.
    
  0.702
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.