STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A061AET3Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
A0A060W6P4
Uncharacterized protein.
   
 
 0.949
A0A060X6F8
Uncharacterized protein.
   
 
 0.949
A0A060VNX9
Uncharacterized protein.
    
 
 0.945
A0A060XK72
Uncharacterized protein.
    
 
 0.945
A0A060X6B4
Uncharacterized protein.
    
 
 0.942
A0A060YJI9
Uncharacterized protein.
    
 
 0.942
A0A060WZ94
Uncharacterized protein.
   
 
 0.923
A0A060XJI1
MPN domain-containing protein.
   
 
 0.923
A0A060XNR8
MPN domain-containing protein.
   
 
 0.923
A0A060WUL3
UBX domain-containing protein.
   
 
 0.860
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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