STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A061AFA7Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
A0A060YNY3
Uncharacterized protein.
    
 0.882
A0A060XPR2
Phosphoinositide phospholipase C.
   
 0.875
A0A060YTK9
Uncharacterized protein.
   
 0.872
A0A060YY12
Phosphoinositide phospholipase C.
   
 0.872
A0A060XPQ3
Phosphoinositide phospholipase C.
   
 0.869
A0A060XUK3
Uncharacterized protein.
   
 0.869
A0A060Y3G0
Uncharacterized protein.
   
 0.869
A0A060YKC2
Phosphoinositide phospholipase C.
   
 0.869
A0A060YPJ4
Phosphoinositide phospholipase C.
   
 0.869
A0A060YQZ3
Phosphoinositide phospholipase C.
   
 0.869
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.