STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RT36-2Mitochondrial 28S ribosomal protein S36. (108 aa)    
Predicted Functional Partners:
RT21
Mitochondrial 28S ribosomal protein S21.
   
 0.917
A0A060WZ84
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.909
A0A060YUW4
Uncharacterized protein.
     
 0.884
A0A060ZGN1
Uncharacterized protein.
   
 0.881
A0A060XNY9
MRP-S28 domain-containing protein.
   
 
 0.871
A0A060XSL8
Uncharacterized protein.
     
 0.870
A0A060VPP3
Uncharacterized protein.
   
 0.868
RT18A
28S ribosomal protein S18a, mitochondrial.
   
 0.868
A0A060XC61
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
     
 0.867
A0A060VZL9
Uncharacterized protein.
   
 0.866
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.