STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIFMacrophage migration inhibitory factor. (114 aa)    
Predicted Functional Partners:
A0A060W7K3
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
     
 0.873
A0A060WGY6
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
     
 0.873
A0A060WW68
Thyroglobulin type-1 domain-containing protein.
   
 0.865
A0A060XUA4
Uncharacterized protein.
   
 0.865
RS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.865
A0A060Y389
VOC domain-containing protein.
     
 0.863
A0A060YD61
Aminotran_1_2 domain-containing protein.
     
 0.861
A0A060YQH0
Uncharacterized protein.
     
 0.861
A0A060YUH8
Aminotran_1_2 domain-containing protein.
     
 0.861
A0A060VVH5
Uncharacterized protein.
     
 0.858
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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