STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CathYCathepsin Y; Belongs to the peptidase C1 family. (290 aa)    
Predicted Functional Partners:
A0A060XQD4
Uncharacterized protein; Belongs to the peptidase C1 family.
   
0.920
A0A060XWL2
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.920
A0A060VPE5
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
0.896
A0A060W516
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
0.896
A0A060YXS6
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
0.896
A0A060W9X2
Uncharacterized protein; Belongs to the peptidase C1 family.
   
0.892
A0A060YDD1
Uncharacterized protein.
     
 0.875
A0A060WW68
Thyroglobulin type-1 domain-containing protein.
   
 0.874
A0A060XUA4
Uncharacterized protein.
   
 0.874
RS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.874
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.