STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601271Uncharacterized protein LOC106601271 isoform X1. (191 aa)    
Predicted Functional Partners:
LOC106570240
Membrane progestin receptor alpha-B-like.
    
 
 0.606
LOC106588616
Membrane progestin receptor alpha-B-like isoform X1.
    
 
 0.606
LOC106605007
Membrane progestin receptor alpha-B-like.
    
 
 0.606
LOC106584320
Membrane progestin receptor alpha-B-like.
    
 
 0.606
lman1
Protein ERGIC-53 isoform X2.
    
  0.600
LOC100846969
Nuclear Progesterone receptor.
      
 0.598
LOC106610685
Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family.
     
 0.559
pm20d2
Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family.
     
 0.559
LOC106608390
Transmembrane protein 214-like.
      
 0.558
ENSSSAP00000079429
Dihydrouridine synthase 4-like (S. cerevisiae).
   
 0.519
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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