STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jade1Protein Jade-1. (540 aa)    
Predicted Functional Partners:
meaf6
Chromatin modification-related protein MEAF6 isoform X1.
    
 0.868
LOC106589015
Chromatin modification-related protein MEAF6 isoform X3.
    
 0.868
LOC106605735
Inhibitor of growth protein.
    
 0.670
LOC106575935
Inhibitor of growth protein 4-like.
    
 0.670
ENSSSAP00000054548
annotation not available
    
 0.670
LOC106588433
Inhibitor of growth protein.
    
 0.670
LOC106569992
Inhibitor of growth protein.
    
 0.670
LOC106613862
Inhibitor of growth protein.
    
 0.658
ing5
Salmo salar inhibitor of growth family, member 5a (ing5), mRNA.
    
 0.658
snap29
Synaptosomal-associated protein 29-like.
    
 
 0.640
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.