Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106560214Homeobox protein EMX1-like. (200 aa)    
Predicted Functional Partners:
LOC106607210
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.666
LOC100380772
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.666
ctnnb1
Catenin beta-1.
     
 0.596
lhx1
LIM/homeobox protein Lhx1 isoform X1.
     
 0.565
LOC106603274
LIM/homeobox protein Lhx1-like isoform X1.
     
 0.565
LOC106581220
LIM/homeobox protein Lhx1-like.
     
 0.565
LOC106613102
LIM/homeobox protein Lhx1.
     
 0.565
LOC106562191
LIM/homeobox protein Lhx5 isoform X1.
     
 0.565
LOC106568314
LIM/homeobox protein Lhx5-like isoform X1.
     
 0.565
LOC106580473
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
    
   0.549
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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