STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcaf10DDB1- and CUL4-associated factor 10. (434 aa)    
Predicted Functional Partners:
ttc37
Tetratricopeptide repeat protein 37.
    
 0.949
LOC106570056
Helicase SKI2W-like isoform X1.
    
 0.867
LOC106588514
Helicase SKI2W-like.
    
 0.867
dcaf4
DDB1- and CUL4-associated factor 4 isoform X1.
     
 0.863
LOC106601090
DDB1- and CUL4-associated factor 5-like.
     
 0.836
dcaf5
DDB1- and CUL4-associated factor 5 isoform X1.
     
 0.836
cdc73
Parafibromin.
    
 0.833
cdc73-2
Parafibromin isoform X1.
    
 0.833
LOC106561926
DNA damage-binding protein 1-like isoform X1.
    
 0.831
ddb1
Salmo salar DNA damage-binding protein 1 (ddb1), mRNA.
    
 0.831
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.