STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106588023Zinc transporter ZIP9-like. (296 aa)    
Predicted Functional Partners:
LOC106611439
Pleckstrin homology domain-containing family D member 1-like.
      
 0.745
slc30a5
Zinc transporter 5.
   
 
 0.636
slc39a6
Zinc transporter ZIP6.
    
 
 0.608
LOC106563524
Zinc transporter ZIP13-like isoform X1.
    
 
 0.605
LOC106591239
Zinc transporter ZIP8-like isoform X2.
    
 
 0.598
slc39a14
Zinc transporter ZIP14.
    
 
 0.597
gsr
Zinc transporter 9.
      
 0.573
ke4
Zinc transporter SLC39A7 isoform X1.
    
 
0.573
LOC106588393
Zinc transporter Slc39a7-like.
    
 
 0.573
LOC106608191
Sodium/bile acid cotransporter-like.
      
 0.550
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.