Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
smoc1SPARC-related modular calcium-binding protein 1. (448 aa)    
Predicted Functional Partners:
LOC106600641
Sidoreflexin.
      
 0.718
tmem181
Transmembrane protein 181 isoform X1.
      
 0.718
toe1
Target of EGR1 protein 1.
      
 0.718
zn710
Zinc finger protein 710 isoform X1.
      
 0.718
LOC106599369
Target of EGR1 protein 1-like.
      
 0.718
tdrp
Testis development-related protein.
      
 0.701
mipol1
Mirror-image polydactyly gene 1 protein isoform X2.
      
 0.699
wdr27
WD repeat-containing protein 27 isoform X2.
      
 0.699
ush2a
LOW QUALITY PROTEIN: usherin.
   
  
 0.692
LOC106609075
Leucine-rich repeat LGI family member 2-like.
      
 0.686
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.