STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcnx1Pecanex-like protein 1 isoform X1. (2300 aa)    
Predicted Functional Partners:
LOC106610877
Kelch-like protein 28.
      
 0.596
KLHL28
Kelch-like protein 28.
      
 0.596
setd4
SET domain-containing protein 4 isoform X1.
      
 0.590
LOC106571085
Signal-induced proliferation-associated 1-like protein 1 isoform X1.
  
   
 0.590
ENSSSAP00000022977
Signal-induced proliferation-associated 1 like 1.
  
   
 0.580
LOC106609030
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
      
 0.575
ENSSSAP00000092885
Uncharacterized LOC106578061.
      
 0.575
SIPA1L1-2
Signal-induced proliferation-associated 1-like protein 1 isoform X1.
  
   
 0.511
SIPA1L1
Signal-induced proliferation-associated 1-like protein 1 isoform X1.
  
   
 0.508
LOC106583772
LIM and cysteine-rich domains protein 1-like.
      
 0.476
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.