STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000000444Family with sequence similarity 136 member A. (152 aa)    
Predicted Functional Partners:
fam69a
Protein FAM69A isoform X4.
      
 0.511
LOC106584168
Protein FAM69A-like isoform X1.
      
 0.511
wdr55
WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis. Belongs to the WD repeat WDR55 family.
   
  
 0.449
EPRS1
Bifunctional glutamate/proline--tRNA ligase-like.
      
 0.418
LOC106561878
Bifunctional glutamate/proline--tRNA ligase-like isoform X1.
      
 0.418
LOC106603664
Dystrobrevin.
      
 0.408
ENSSSAP00000052591
annotation not available
      
 0.408
LOC106611333
Dystrobrevin beta-like isoform X2.
      
 0.408
LOC100195747
Dystrobrevin.
      
 0.408
dtna
Dystrobrevin.
      
 0.408
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.