STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hhatProtein-cysteine N-palmitoyltransferase HHAT; Belongs to the membrane-bound acyltransferase family. (489 aa)    
Predicted Functional Partners:
aasdh
acyl-CoA synthetase family member 4 isoform X1.
  
  
 0.948
LOC106593073
Partner and localizer of BRCA2-like.
  
 
 0.922
LOC100194699
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.922
LOC106564178
Partner and localizer of BRCA2-like.
  
 
 0.922
LOC106599328
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.708
LOC106578610
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.708
LOC106569233
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.708
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.708
LOC106572671
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.701
dhh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.701
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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