STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106613317Doublecortin domain-containing protein 2-like isoform X1. (489 aa)    
Predicted Functional Partners:
shtn1
Shootin-1.
      
 0.699
pot1
Protection of telomeres protein 1 isoform X1.
    
 
 0.661
dnaaf4
Dyslexia susceptibility 1 candidate gene 1 protein.
      
 0.638
LOC106587431
Dyslexia susceptibility 1 candidate gene 1 protein homolog isoform X1.
      
 0.638
allc
Probable allantoicase.
      
 0.626
LOC106560267
Ras-like protein family member 11B.
      
 0.580
rasl11b
Ras-like protein family member 11B.
      
 0.580
LOC106573687
C-Maf-inducing protein-like.
      
 0.579
LOC106560887
C-Maf-inducing protein-like.
      
 0.579
timeless
Protein timeless homolog.
      
 0.544
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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