STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000001014annotation not available (3617 aa)    
Predicted Functional Partners:
vamp3
Vesicle-associated membrane protein 3.
     
 0.504
LOC100196669
Protein S100-A13-like; Belongs to the S-100 family.
     
 0.494
ap2m1
AP-2 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.
    
  0.473
ENSSSAP00000009277
annotation not available
    
  0.473
LOC106580654
AP-2 complex subunit mu-B-like isoform X1; Belongs to the adaptor complexes medium subunit family.
    
  0.473
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
  0.473
nsl1
Kinetochore-associated protein NSL1 homolog isoform X1.
    
  0.449
WDR63
WD repeat-containing protein 63 isoform X1.
    
 0.444
LOC106587384
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 
  0.411
LOC106562274
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 
  0.411
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.