STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603050Transgelin-3-like. (199 aa)    
Predicted Functional Partners:
wdr90
WD repeat-containing protein 90.
    
 
 0.784
LOC106582592
Thioredoxin domain-containing protein 3 homolog; Belongs to the NDK family.
    
 
 0.738
nme8
Thioredoxin domain-containing protein 3 isoform X2; Belongs to the NDK family.
    
 
 0.738
ENSSSAP00000093050
annotation not available
    
 
 0.738
enkur
Enkurin.
   
 
 0.738
ENSSSAP00000017985
annotation not available
    
 
 0.733
ak9
Adenylate kinase 9 isoform X1.
   
   0.703
efhc1
EF-hand domain-containing protein 1 isoform X1.
   
 
 0.659
efhc2
EF-hand domain-containing family member C2 isoform X1.
   
 
 0.659
ccdc65
Coiled-coil domain-containing protein 65.
   
 
 0.653
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.