STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000001022annotation not available (376 aa)    
Predicted Functional Partners:
ENSSSAP00000004990
Si:ch211-175f11.5.
   
 0.864
mysm1
Histone H2A deubiquitinase MYSM1.
   
 0.847
LOC106613979
Histone H2A deubiquitinase MYSM1-like.
   
 0.847
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily.
    
 0.842
LOC106574678
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.806
LOC106575630
Actin-related protein 2/3 complex subunit 2.
   
 0.806
LOC106566026
Troponin I, slow skeletal muscle-like.
   
 0.788
LOC106582713
Troponin I, slow skeletal muscle-like isoform X2.
   
 0.788
LOC106608776
E3 ubiquitin-protein ligase KEG-like.
    
 0.785
acl6b
Actin-like protein 6B isoform X1; Belongs to the actin family.
   
 0.777
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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