STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601213TRIO and F-actin-binding protein-like. (497 aa)    
Predicted Functional Partners:
rai14
Ankycorbin isoform X2.
   
 
 0.622
LOC106568157
Ankycorbin-like isoform X2.
   
 
 0.622
LOC106613472
Ankyrin repeat domain-containing protein 24-like.
   
 
 0.620
LOC106584414
Ankyrin repeat domain-containing protein 24-like isoform X1.
   
 
 0.620
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
      
 0.605
LOC106573425
Phosphatidylinositol phosphatase PTPRQ-like.
      
 0.591
dfnb59
Pejvakin.
     
 0.591
ENSSSAP00000053024
annotation not available
     
 0.591
sptan1
Spectrin alpha chain, non-erythrocytic 1 isoform X1.
   
 
 0.591
sptan1-2
Spectrin alpha chain, non-erythrocytic 1-like isoform X1.
   
 
 0.591
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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