Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STRAPSerine/threonine kinase receptor associated protein. (320 aa)    
Predicted Functional Partners:
gemin7
Gem-associated protein 7 isoform X1.
    
 
 0.957
ddx20
Probable ATP-dependent RNA helicase DDX20.
    
 
 0.942
gemin6
Gem-associated protein 6.
    
 
 0.927
LOC106611181
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
   
 
 0.923
LOC106601119
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
   
 
 0.923
LOC106603490
Gem-associated protein 5-like.
    
 
 0.912
gemin8
Gem-associated protein 8.
    
 
 0.893
ENSSSAP00000091702
annotation not available
    
 
 0.893
LOC106612668
Gem-associated protein 4-like.
    
 
 0.873
LOC106580777
Gem-associated protein 4-like.
    
 
 0.873
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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